rs108624951 SNP Detail

Summary

• ID
  rs108624951
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:8382401 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGAGTCCCA CACTCTATGG
  GAATTCCTGA GGAGCAGGCA TGAAGGCAGC TACCCTCAGG GTTTAGTAGC AGCTCCGGTG
  CCCAGGATGC AGGACATCAG CCTTGTATCC TGCAGTCACA AGAATGAGCG TGTACAAAGA
  CGTGGAATGA CCTTGCAGAT TATTCCAGCC CCTCAGGGCA CAGATGAAAA CAGAGCCTGG
  R
  ATGGAAAGGC AAACAGGTGC CACATGGGGT GCTGCAGGCA GAACGGGAGA CCCCAGAATC
  AAGGACAACT GGGCAAAAGC CATATTCCCC ACCCCTGTCC TAAATGAACT GAATGGACAT
  TTCTAGAGGC AGGATCTGGG AACATGTATT AAAACAGCAC GGTACATCAT GTCTCCAAAA
  ATGAAGACAT TACACAGAAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss145978371	ENSMUSSNP7199376	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs108624951					SNP	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:8382401 () rs orientation: forward

Symbol	Name	Function Class
Gm42252	predicted gene, 42252	within coordinates
Rr588523	regulatory region 588523	1180 bp distal
Rr588524	regulatory region 588524	1534 bp distal
Rr588525	regulatory region 588525	within coordinates
Rr588526	regulatory region 588526	663 bp distal