rs108622721 SNP Detail

Summary

• ID
  rs108622721
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:141458119 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCACGGTCC CTGCCAACAA
  AGTTCCCACC TCCTCCTCAC TTCTTGCCTG TTCTCTGCTT GAAACAGCCA ACCAGCTAAA
  GGTATCTCCT CCGATCTTAT TTTGGTTTTG GTTTTAAAGG TAGACGTGTG TGTGTGTGTG
  TGTGCGCGTG TGCGTGTGCG TGTGCGTGTG CGTGTGTGTG TGTGTGCTTT GTTATACATC
  R
  GTGGGTGTGC TCAGTGCAAG CGGTGCATGG GGAGGCAAGA GGGCGACTTG GGGGCTCAGT
  TTCGTCTCGC ATCATGTGGG TCCAGGGTTG GCAAGCGGTG TGTGGGGAGG CAAGAGGGCA
  ACTTGGGGGC TCAGTTTCGT CTCCCATCAT GTGGGTCCAG GGTTGGCAAA CGCAGGTCCT
  CAGGGTTAGC AGGAAGCTCC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss147742727	ENSMUSSNP7098611	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	A
ss321389335	CHEV_4_141286723	CHEVERUD	SCREENING_POP	f	SNP				A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs108622721					SNP	A	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:141458119 () rs orientation: forward

Symbol	Name	Function Class
Gm34863	predicted gene, 34863	within coordinates
Rr603867	regulatory region 603867	1257 bp distal
Rr603868	regulatory region 603868	991 bp distal
Rr603869	regulatory region 603869	944 bp proximal