rs108615781 SNP Detail

Summary

• ID
  rs108615781
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:21531800 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTTTCCTCTC CTGTCTGTAC
  TCAGTTGGCT TCCTAAAATA GAGAGGGATA AGGACCACAG GCTTCACGTC ATGAATGAGC
  TCCGTCTCAG CTGTGGGCTC TCCAGAAATG ATTCAACACC ACAGATGGAA TCCACATGTG
  AATATCCACG TGACGACTGA CTAGCAAGAT TTCAATGAAA CCAGAGAACA TTTTTTTTTT
  Y
  TTTAGCTCAA GTATATTTGG CCAGTGTAGG TTGGGGGAAG GCCTGGAATC ACTGGAATCA
  CAGTGAACAA TTGAGATATT GAAGGCAAAG AAACAAAAAA AAATCCATGG AAAGACCTTC
  TAAGCAATGA GGGTAGGCTT TTTGGAAGCA TTGGTCTGTT TGTTTCCAGG TTTGGTTTGT
  ATTTGTTCTT TTTAAAGCCA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss134682130	ENSMUSSNP3595266	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs108615781					SNP	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:21531800 () rs orientation: forward

Symbol	Name	Function Class
Gm31610	predicted gene, 31610	within coordinates
Rr574124	regulatory region 574124	within coordinates
Rr574125	regulatory region 574125	1219 bp proximal