rs108603436 SNP Detail

Summary

• ID
  rs108603436
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:20562600 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGTGCGCTGT GTGTGCAGAG
  CTTACTGTAT GTGTGCAGAG ACAAACAGCA GCAGAATGCC AAAAGGCTTC AGAGAGAGGC
  ATAGAGCCCT GCTTAGCAGA AGGGAAGAAG TGTTATTTGG CCTCCCAAGA CCATTTCGAG
  TCTGTTTTTC TGTTTCACAT CCTCTTACAT TAGGTCATCC TGCCTCCATT TCCAGCCTGG
  K
  TTGTCTGCCT ATCTCTTATT CCCCATCCCT ACCCCGTACA TCTCTTTCCT CTGTCCCATT
  TGACAGTCAC CTTCTGGGGG ACAGTAAGAG GGAGGGGGAT AGAGATTATA CCTGACTCTG
  CCTAGCACAC AGTGTGCTCT CATGCAGGGA GGCTGACCCA CAGAGAAGGT GCACGGTCCT
  CTGCTAAGAC CCACCAGTGG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J	MSM/Ms
ss134672225	ENSMUSSNP6825987	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	DBA/2J	MSM/Ms
rs108603436					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:20562600 () rs orientation: forward

Symbol	Name	Function Class
Rr574081	regulatory region 574081	823 bp proximal
Rr574082	regulatory region 574082	952 bp proximal