rs108600904 SNP Detail

Summary

• ID
  rs108600904
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:124380388 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGATTTTGCT GAAAGGACCC
  TGATATAGCT GTCTCTTGTG AGACTAGGCC AGAGCCTAGC AAACACATAA GTAGATGCTC
  ACAGTCAGCT ATTGGATGGA GCACAGGGCC CCCAATGGAG GAGCTAGAGA AAGTACTCAA
  GGAGCTAAAG GGATCTGCAA CCCTATAGGT GGAACAACAA TATGAACTAA CCAGTATCCC
  R
  GAGCTCTTGA CTCTAGCTGC ATATGTATCA AAAGATGGCC TAGTCGGCCA TCACTGCAAA
  GAGAGGCCCA TTGGACTTGC AAACTTTATA TGCCCCAGTA CAGGGGAACG CCAGGGCCAA
  AAAATGGGAA TGGGTGGGTA GGGGAGTTGG GGGGGGGAGG GGTATAGGGG ACTTTTGGGA
  TAGCATTCTA AATGTAATTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss135790714	ENSMUSSNP2593398	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs108600904					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:124380388 () rs orientation: forward

Symbol	Name	Function Class
Gm9379	predicted gene 9379	1789 bp downstream
Rr584593	regulatory region 584593	771 bp distal
Rr584594	regulatory region 584594	876 bp proximal
Rr584595	regulatory region 584595	988 bp proximal