rs108596533 SNP Detail

Summary

• ID
  rs108596533
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:92259279 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATTATACCT AGAAAAATGG
  AATATAAATA GGCCAAGGCA CCACAGAATA TTAATAAGCT TAAGCAAAAC AAATAAAACA
  CTTAATTTAG GATATAAGAG GGGGAAAAAA GCATTTGTTA CAATCACAGA AGAGAACAAA
  GTGAGATCTC ACTGAAACTT AAAACAGTGA GTGCTCACTG AGTCACAGGT CTCAACAGTG
  G
  TGATGTCCAG GAACAGGATA TTTCCCATTT CGTAGAGTCC CAGTCAAGCC AGTCATGCAT
  GGATTTGCAT TTTGGTTTGG AAATTTTGGG ACCTGCCCAC TATCAGTCAG TGTTGCTCCC
  ACTCGACTGG CCAGATAGTC CTATAAATTG GTCCTTGACT GTGAGACTGC AGACTCCTGG
  TACTCAGGTC CTAGGCTACT                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss135481005	ENSMUSSNP1976458	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	A/J
rs108596533					SNP	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:92259279 () rs orientation: forward

Symbol	Name	Function Class
Sprr2e	small proline-rich protein 2E	171 bp upstream
Tssr30284	transcription start site region 30284	169 bp upstream