rs108595640 SNP Detail

Summary

• ID
  rs108595640
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:90754731 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTTTCTCCCT AGTATTGAAT AAATAAACCT TAAAAGACTG
  AATGCACAAA GCAAGTTGCA ATGTTCTTTT GCTTTTTGGT TTTTTTTTTT TTTGGTTTTG
  T
  TTTTGTTTTT TTAAAGACAA GGTCTCCCTA CATAGCCCTG GCTGGCTTTG AACTAACAGA
  TAGACCCGCC TCTGCCTCTA CCTCTCAAGT GCTGTGACT                       
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss133379584	ENSMUSSNP4622232	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs108595640					SNP	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:90754731 () rs orientation: forward

Symbol	Name	Function Class
E130314K07Rik	RIKEN cDNA E130314K07 gene	within coordinates
Iqsec1	IQ motif and Sec7 domain 1	Intron
Rr634323	regulatory region 634323	1101 bp proximal