rs108579476 SNP Detail

Summary

• ID
  rs108579476
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:146753103 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A TATTATATGA TTAAAAAGAA CACCAACAGT AATTAGGGTC
  CCTTTGCCCA ATTACCAAAG AGCCTGACAC ATAATTTATG CTCAATAAAT ACTTGTAGAA
  T
  GAAGTCGTGA AAGAATACAT TCTCCTGTGA CTATTATTTT CATGGAGGTA GACTTAGGCA
  GCTATTTTTA AAAAATGTAA AATTTGGGTT TTCTGTAGAA T                    
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss136046991	ENSMUSSNP6359528	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs108579476					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:146753103 () rs orientation: forward

Symbol	Name	Function Class
Rr587115	regulatory region 587115	375 bp distal