rs108527205 SNP Detail

Summary

• ID
  rs108527205
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:4463821 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAAGTCTGA GTCAGCACTG
  CATCTGGTCC TTCTTTATTT ACAAGATCAT TAAGATCACG TCCTACCTTT TCCCATTTAA
  GGTGATGAAT CTCTGGTCCA TTTATTATGA ACCATAAACA GACTTGGGAG ACAAAGATAA
  AAACTTTTGT CAAATCTTTC CTTTTAACTC TAACTCCTCT TTCCCTGAGA GAGGCTTTGA
  T
  ATCCTTAATG AAGCGTGCCT CTTTAGAAAG TTTTTGGCCC ATTTCTATAA GACGGAGAAA
  TGTTAACTTA CCGAGGATGA CTTTCTCTCA CGAGCGGTGA GAACACTCCT CAAAACGACT
  TCATTGTGGT GACCTTCTAA GGAAAATGGG CTCTGTCCAG CGAGGGTCCG TACCTCGGGT
  CCCACATTTG GGCGCCACTT                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss145948730	ENSMUSSNP4326939	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs108527205					SNP	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:4463821 () rs orientation: forward

Symbol	Name	Function Class
Rr588287	regulatory region 588287	345 bp proximal
Tssr40838	transcription start site region 40838	305 bp downstream