rs108518748 SNP Detail

Summary

• ID
  rs108518748
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:172531575 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGAAACTGT CTCATGAGAG
  GATGTGTTGC TGAAACAGAC ACTTGAGAGG ATGTGTGATG TTTAGAAGGA AAATAAATAC
  AACCCCACAG ACAATGAGAT CCCTTGCATT GGTTCGCCTT GCAATGCTTT GCTGGTCTGA
  CTTCCTTAAG AGAAATGCTT CACGAAGTAC CAGTGGTGTC CTGGCTGCTT CCACGGACTC
  T
  TGCTGATTCA GCAGAGCCTC TTGAGTTTCC TCTGGGTCTA GCCACTGTTA CTGATTTGTG
  TTTTGTGTTT GCTGACTGGA CTGGATTGCC GCTATTACTT CCTGTTTGAT GTTTTTCACT
  GGTCTGCTGA TACCCTGACA ATAAAGATTG GCATCAGCCC AAAGAACTAC TTCTAAACAG
  GTCCACATCC CCCTTGTCCT                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	LG/J	SM/J
ss148320470	ENSMUSSNP315470	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
ss320619738	CHEV_2_172515283	CHEVERUD	SCREENING_POP	f	SNP		T	T
SNP Consensus Information
SNP					Consensus Type	A/J	LG/J	SM/J
rs108518748					SNP	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:172531575 () rs orientation: forward

Symbol	Name	Function Class
Rr571713	regulatory region 571713	1156 bp distal
Rr571714	regulatory region 571714	1283 bp proximal