rs108516910 SNP Detail

Summary

• ID
  rs108516910
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:17977461 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTTATATCC CAATATCAGC
  TCCCCTTCTC TCCCCAGCCC TCCCCTCACA CAGTTCTTCC CCCCTTCCCC CTCCTCTTCT
  CCTTTGAGAA GGGGAAGCCC CTCCTGTGTA TTACTCCACC CTGGAACATC AAGTCACTGC
  AGGACTAGGC ACATTCTCTT CTACTGAGGC CAAACAAGGC AGCCCAGTTA GGGGAATGGG
  R
  TCCACAGTAG GCAACAGGGA CAGCCCCCAG TCCAGTTGTT GGAGAGACCT GCATGAAGAC
  CAATCTACAC ATCTGCTACA TATGTGGAGG GATCCTAGGT CCAGTCCATG CTCACTCTTT
  GGATGGTGGT TCAGTCTCTG AGAGCCCCTA AGGGTCAGGT TAGTTGACTC TGTTGGTCTT
  TCTGTGGAGA AAGGAAAAGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss148438428	ENSMUSSNP1408997	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs108516910					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:17977461 () rs orientation: forward

Symbol	Name	Function Class
Mill1	MHC I like leukocyte 1	1811 bp upstream
Rr642879	regulatory region 642879	611 bp proximal
Tssr64734	transcription start site region 64734	1666 bp upstream
Tssr64735	transcription start site region 64735	1699 bp upstream
Tssr64736	transcription start site region 64736	1849 bp upstream