rs108500364 SNP Detail

Summary

• ID
  rs108500364
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:140937818 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      C CCTTCACTTA GGACGCATCA CTCCCTGATT GGCTGCAGCC
  CATGGCCGAG CTGACGTTCA CGGGAAAAGC AGAGTACAAG TAGTCATAAA TACCCTTGGC
  T
  CATGCGCAGA TTATTTGTTT ACCACTTAGA ACACAGGATG TCAACGCCAT CTTGTGACGG
  CGAATGTGGG GGCGGCTCCC AACATATGTG ATTCTGTGTG T                    
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147728363	ENSMUSSNP3058071	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs108500364					SNP	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:140937818 () rs orientation: forward

Symbol	Name	Function Class
Gm68349	predicted gene, 68349	181 bp upstream
Rr398649	regulatory region 398649	within coordinates
Rr603685	regulatory region 603685	within coordinates
Tssr40035	transcription start site region 40035	105 bp upstream