rs108486373 SNP Detail

Summary

• ID
  rs108486373
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:7730411 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTGATGCTC GCTTTGAGAA
  ATTACATCCA GATACAGTAC TCTCTCTGGT GTGTGTGTCT GTCATCTCCT GACTTCTTGC
  CCACCTGATT ACTGAAATCC TGATTCCCTG CGGGTAGAAG GGCCGACTGA GTCCAGTCAG
  TGGCAACTTT TGATCATGGT GTTTTGTAGG AGCAATAGTA ACCCAAACAA AGACAGTACC
  Y
  GAGGAACAAA CATTGCACCC AAAGCCCCAC CCAAGAACCA AGTTGTAGAT CACAATGAGC
  CCTTAAAGAA CGCTAGCCAT TAACCAATAC TCAAAACAAA GCAAAGACAG TCTGTGGGGT
  AGCCAACATC AAGCCTATTT TCTGTGGGTC ATGCAGTCAG AGGTTAGGTC TTTTGGAGGA
  CAGAAGTGGA GTTGACAGCA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss132954039	ENSMUSSNP1206853	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs108486373					SNP	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:7730411 () rs orientation: forward

Symbol	Name	Function Class
Rr626314	regulatory region 626314	1761 bp proximal