rs108446829 SNP Detail

Summary

• ID
  rs108446829
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:27157672 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCGTGTCCC TCCCAGGTGC
  GTGGATTTGA GTGAGTTTAC TTCAGATTTT TCAGTACAAC TGGCTATTGT TTTTATGTCT
  CTATGGAAAA CCATGTTTTT GCCTCCTGGA GCTTATCTGT ATGATTGTAC AATTTACTCA
  CAGGACCTTT TTTTTTTTTA AGATTTATTT ACTATACATA AGTACACTGT AGCTGACTTC
  M
  GTCGCACCAG AAGAGGGCAT TAGATCTCAT TACAGATGGT TGGTTGTGAG CCACCATGTT
  GCTGGAAATT GAACTCAGGA CCTACGGAAG AGCAGTCAGT GCTCTTACCC GCTGAGCCAT
  CTCGCCAGCC CCCACAGGAC TGTTCTTAAC CTTCAGTTAT TATAAATTGT CTGATGCTCT
  GAATAAAGCT ATTGTATGAG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss134702056	ENSMUSSNP639788	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs108446829					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:27157672 () rs orientation: forward

Symbol	Name	Function Class
Ect2	ect2 oncogene	Intron
Rr574344	regulatory region 574344	167 bp distal