rs108443806 SNP Detail

Summary

• ID
  rs108443806
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:121758232 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGATATGAAA ACATCTGCTT AAAAAAAAAA TAGCACCACT
  ACACATAATA TAATTATTCA GCCTGGTACC ATAGACATTT TGAGGAGAAT GTATTAAAAA
  W
  TTTTTTAGAA GTTTGTAAAT TGATGGTTCA TAGGATAAAT GACTTACAGG TAACATAAAA
  TAAGTGCAAA TTACCATTTT AAAGGAGAAA TTAATCCGG                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss135732790	ENSMUSSNP2859715	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	T
ss320907360	CHEV_3_121667501	CHEVERUD	SCREENING_POP	f	SNP				A	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs108443806					SNP	A	A	T	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:121758232 () rs orientation: forward

Symbol	Name	Function Class
Arhgap29	Rho GTPase activating protein 29	Intron
Rr584209	regulatory region 584209	555 bp distal
Rr584210	regulatory region 584210	75 bp distal
Rr584211	regulatory region 584211	210 bp distal