rs108344454 SNP Detail

Summary

• ID
  rs108344454
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:48482302 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTGTGGTAA TTTCAGACAA
  TGCTCATAGA AAGTTAAGAC TTTATTAAGA GATACGTTTG CAAATCAAAA CACACAAATA
  AATCAATGTC ATACTGCAGG GGACAGCATA CCATGACAGA GACTGCTGCA GCAGGCCTAG
  ATGGAGACAT CTCAAAAGCC CTTGGTAGCT CTTTGTAAAA AAAATAAATA AATAAATAAA
  W
  ATAAATTTAA AAAAATAAAA GGATGGTGTC TGGGACCCTG AGAAGCAGGA GACACATCTC
  TCCAGGGGAC CGCCATTAGA AATAAGGGAC TGCCTGCAGC AGGCCAGGAT GGAGACATCT
  CAATAGCCTG TGGCAGCTCT TTGTAAAAAA GAAGCCCATT TCTCCAACTT AGCCCTGGAA
  AACAGCTGTA TAGATTTCAT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss146277848	ENSMUSSNP696185	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs108344454					SNP	T	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:48482302 () rs orientation: forward

Symbol	Name	Function Class
Rr591981	regulatory region 591981	686 bp distal
Rr591982	regulatory region 591982	780 bp distal