rs108341238 SNP Detail

Summary

• ID
  rs108341238
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:124036164 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TACTTGTCTG TAGCTTATGG
  ACCAAGTGTC TTAGAATAAA CCCTTCTCTA TCTGCAACTT GATCTACTAG TACAATTTGA
  TCTACTAGTA CAATCCTTAG ACTTTTACTT TTGTTGCTTA AGTCTGTCTC TAATACTAGT
  TATGATGCTC TAAACAGACT TTAAAAATTA AGATGATTAT GAATAAAATC ATAAAAATAG
  R
  GACTTAATTG AAAATAAGAA AACTCTGGTA TGAACACTCT GGAAATCATT TTGGCGGTTC
  CTCAGAAAAT TGGACATAGT ACTACTGGAA GATCCAGCAA TACCATTCCT GGGCAAATAC
  CCAGAAGATG CTCCGACTTG TAATAAGGAC ACATGCTCCA CTATGTTCAC AGAAGCCTTT
  TTTAAAATAG CCAGAAGCTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss135782982	ENSMUSSNP2208764	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	A
ss320926583	CHEV_3_123945433	CHEVERUD	SCREENING_POP	f	SNP				A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs108341238					SNP	A	G	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:124036164 () rs orientation: forward

Symbol	Name	Function Class
Rr584580	regulatory region 584580	638 bp distal