rs108341163 SNP Detail

Summary

• ID
  rs108341163
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:177480370 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G AAATAGCAAG CCATTTCTCA GAGATGGGTT CCTGAGTTGG
  AGGTCGCAGG AGATGAGAAA AATAGCAAAA GTAAAAGGTA GAATTTACAA CAGCTGCAGT
  A
  GGGAGAGCTT ACACAAGCTA TGTCTTATGC CAAGTAAACT TTTTAAGAGT AGCATCAGCC
  GGGCGTGGTG GCGCACGCCT TTAACCCCAG CACTTGGGAG G                    
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss148363169	ENSMUSSNP1112794	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs108341163					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:177480370 () rs orientation: forward

Symbol	Name	Function Class
Gm14325	predicted gene 14325	Intron
Rr374347	regulatory region 374347	1413 bp downstream
Rr572329	regulatory region 572329	1328 bp proximal
Rr572330	regulatory region 572330	1731 bp proximal
Tssr28052	transcription start site region 28052	1767 bp downstream