rs108333795 SNP Detail

Summary

• ID
  rs108333795
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:50588044 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATGCACAGTT GAGGCATATG TCCTGAAGAT AAGGAGGTTC
  CTGGATGGAT AGGGTAATTC TCTTCCTCTT CTCCCCACTA AAGGCATGTG TACACACACA
  Y
  ACACACACAC ACACACACAC ACACACACAC ACACACACAC TATATCCCCA CATCATATAA
  CAGATAAAAC ACATACACAT TTATACAGTA CACACACAC                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	LG/J	SM/J
ss135163929	ENSMUSSNP5774846	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
ss320758923	CHEV_3_50437517	CHEVERUD	SCREENING_POP	f	SNP		C	T
SNP Consensus Information
SNP					Consensus Type	A/J	LG/J	SM/J
rs108333795					SNP	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:50588044 () rs orientation: forward

Symbol	Name	Function Class
Rr576164	regulatory region 576164	765 bp proximal