rs108320886 SNP Detail

Summary

• ID
  rs108320886
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:39241551 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCTTATAAG CTTTGCTAGC
  TTACACAGAG GTACTGGCAG CCAAGCTGTG TCTGCTTAGA AGAAGGACCC CAATTCACAC
  AGGTTCCGAT ATGCCCAGGG GGCCCCTGAG ACTTACCCCC GACCCCCACT CTATTTTATT
  ACCATCTTTT CCGCTTTTCT GCCATTGACG GTACAGGTAA GATTCAGGGG ACCCAGAAAT
  R
  CCAGGATTCA ACTGTGGCTC TTCCACCCTG TCCTCACGTA GAGGGACAAG CAAATGGCTC
  AAAGCCTAAA GTGACATTTC AGGCTGAATT CTGCGCTAGA CAAATAACTG AGGCTGGGAA
  TTCCAGGAAC CAGAGCCTCA CCCCCTCACA CACACACACA CACACAGCTG TACAGGACTC
  CAGTAAGGAG GAAAAGGGAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss133127857	ENSMUSSNP4408096	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs108320886					SNP	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:39241551 () rs orientation: forward

Symbol	Name	Function Class
Gm26008	predicted gene, 26008	1227 bp downstream
Gm53067	predicted gene, 53067	731 bp downstream
Gm66721	predicted gene, 66721	1007 bp downstream
Rr628990	regulatory region 628990	523 bp distal
Rr628991	regulatory region 628991	within coordinates