rs108310500 SNP Detail

Summary

• ID
  rs108310500
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:182820999 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T CAGGCAACCT CCTCCACTTT TGGCTACCGC CATGATTTAG
  ATCTTGAACA GACCCCATTC CCAAAGCTCA CCTACTACAG GTCCACGCCA CGGAGAGGCA
  R
  AGCCTGGTGG AAGGAAGCTA GATCACTGTT GGAGTGTGGT TAGCCTAGGT GGATATTGGG
  ACAGTACAGT CTCTTCCCCC TCTTTGCTTC CTTGCTTTCA G                    
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss136165887	ENSMUSSNP1919545	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs108310500					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:182820999 () rs orientation: forward

Symbol	Name	Function Class
Rr425028	regulatory region 425028	1604 bp distal
Rr425030	regulatory region 425030	1116 bp distal
Rr425031	regulatory region 425031	1467 bp proximal