rs108306858 SNP Detail

Summary

• ID
  rs108306858
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:130551736 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGAATTCCTC TCAGAGAAAT AGCGTGGGTG TTAATAGATG
  ATGTCAGGTT TTTATTTTTC TACCATGTTA TAAACTGGAA TGTTGAATTT TCCAGCTTTT
  W
  AAAAAAAAAA AAAACCCGGC ATGTTTTGAT CGTCAGTCCC TTGAGCTCTG TACTTGTTTG
  GGGGTTTTAG TTCCCCTCCC TGATCCAGTC TGAAGTTCT                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss135899323	ENSMUSSNP2727544	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs108306858					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:130551736 () rs orientation: forward

Symbol	Name	Function Class
Gm42997	predicted gene 42997	within coordinates
Gm43524	predicted gene 43524	329 bp downstream
Gm65129	predicted gene, 65129	502 bp downstream
Rr585206	regulatory region 585206	within coordinates