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rs108274170 SNP Detail
Summary
  • ID
    rs108274170
  • Variation Type
    SNP
  • Alleles
    C
Genome Location and Flanking Sequence
  • Location
    Chr4:89331288 (GRCm39)
  • SNP Orientation to the Genome
    reverse
  • SNP Reference Flanking Sequence
                        T TGGCGCGGTT TCACACGATT GGTCCATTTA AACATCAACA
    GACTGTCAGA AGGGCAGGAG ATAGGGAGGC ACCTGGCCAG TCAGGACATG TAACGATGGG
    C
    CTGCCCGGGC ATGTCCTGGC CTGTTTTGCT ATGTTCTCAG CCCCTGGTTT CAAAGCTCAC
    AAACAACTCT TTGGGCTATT TGACATACAT TACATGAATC A                    
    
    C = C
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
A/J
DBA/2J
ss133080201 ENSMUSSNP1470238 ENSEMBL ENSEMBL_Sanger f SNP C C
SNP Consensus Information
SNP Consensus Type
A/J
DBA/2J
rs108274170 SNP C C
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr4:89331288 () rs orientation: reverse
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Gm12608 predicted gene 12608 within coordinates
Gm12610 predicted gene 12610 within coordinates
Rr1238 regulatory region 1238 within coordinates
Rr376812 regulatory region 376812 within coordinates
Rr595201 regulatory region 595201 1930 bp proximal

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory