rs108260697 SNP Detail

Summary

• ID
  rs108260697
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:48171978 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G TTCTGAGTCG CTTCCTTGGT GTGTGTGTAT GTGTGTGTGT
  GTGTGTGTGT GTGTGTGTGT GTGTGTGAGA GAGAGAGAGA CAGAGAGAGA GAGAGAGAGA
  G
  AGAGAGAGAG AGACAGAGAG AGAGAGAGAG AGAGAGAGAG AGAGGTGGAG CGTGTGTGTA
  AGGGGGTGAC TTGGAGGAGG GAAGGGTAAA GAGATGGTCC A                    
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss145710369	ENSMUSSNP6431262	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs108260697					SNP	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:48171978 () rs orientation: forward

Symbol	Name	Function Class
Rr392692	regulatory region 392692	802 bp upstream
Tssr145062	transcription start site region 145062	1222 bp upstream