rs108258804 SNP Detail

Summary

• ID
  rs108258804
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:124380497 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T GACTCTAGCT GCATATGTAT CAAAAGATGG CCTAGTCGGC
  CATCACTGCA AAGAGAGGCC CATTGGACTT GCAAACTTTA TATGCCCCAG TACAGGGGAA
  Y
  GCCAGGGCCA AAAAATGGGA ATGGGTGGGT AGGGGAGTTG GGGGGGGGAG GGGTATAGGG
  GACTTTTGGG ATAGCATTCT AAATGTAATT GAGGAAAATA C                    
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss135790717	ENSMUSSNP3686667	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs108258804					SNP	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:124380497 () rs orientation: forward

Symbol	Name	Function Class
Gm9379	predicted gene 9379	1680 bp downstream
Rr584593	regulatory region 584593	880 bp distal
Rr584594	regulatory region 584594	767 bp proximal
Rr584595	regulatory region 584595	879 bp proximal