rs108238847 SNP Detail

Summary

• ID
  rs108238847
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:79959627 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T TTCAGAATGC TTGCTTCCTC AGAAGTTCAA CGCTGTACAC
  TGAACACTGT GTTTGCTTCC CAGTTATAGA AAACACTTGC AGCTTTGCTA ATGTTTCCTG
  K
  GGGTTTTTTT TTTTGTGTGT GTGACTATTT TCTTATGGTT ATTCTAATAC TATGTATTAT
  TCTATTTAAG ATTTTTCCAG ATGTCGATGA ATAACAAAAT A                    
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss135378796	ENSMUSSNP257223	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs108238847					SNP	T	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:79959627 () rs orientation: forward

Symbol	Name	Function Class
Gm65495	predicted gene, 65495	within coordinates
Rr578634	regulatory region 578634	within coordinates
Rr578635	regulatory region 578635	596 bp proximal