rs108238309 SNP Detail

Summary

• ID
  rs108238309
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:115306668 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                      C TCTCCTTCCA TTGATGCATG ACAAGGCCAT CTTTTGCTAT
  ATATGCAGCT GGAGCTATGT GTACCCCTTT GTTGATGGCT TAGTTCCTGG GAGTTCAGAG
  K
  GTCTGGATGG TTGATATCAT TCTTCCTATG GGGTTGCTAA CACCTTCAAC TCCTTCTGTC
  CCTTCTCTAA CTCCTTTATT AGAGACCCCA GTGCTCAGTC C                    
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss139821264	ENSMUSSNP1006905	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs108238309					SNP	T	T	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:115306668 () rs orientation: reverse

Symbol	Name	Function Class
Rr597735	regulatory region 597735	1211 bp proximal