rs108191129 SNP Detail

Summary

• ID
  rs108191129
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:129873055 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGCTG TGATTATTTT TCTCCCTTCT
  W
  AGTAAGACTG AAGCATCCAC ACTTG                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss135891548	ENSMUSSNP431174	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	T	A
ss320964159	CHEV_3_129782324	CHEVERUD	SCREENING_POP	f	SNP				A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs108191129					SNP	A	T	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:129873055 () rs orientation: forward

Symbol	Name	Function Class
Gm42663	predicted gene 42663	1373 bp upstream
Rr585128	regulatory region 585128	470 bp proximal
Rr585129	regulatory region 585129	585 bp proximal