rs108188618 SNP Detail

Summary

• ID
  rs108188618
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:55131092 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAGTGTCCA GTTGCCTGAG
  ATGGGACATC CAACAGGCCA CAAAACCCAA TGCTACTCAA GTCAAGCTGG GTGAACTAAT
  GAATTTCATC AGCTCACTTA GAGGATTTTG GATGCCTCTG ACAGAAAAGC CCTACCCCAG
  AATGGTAGAT GACGCAGGAA AGCCAAATCG CTGGGGCCTC AAACCATAAC CAACTTTGTA
  C
  CTCCCCACAA AAGCACATTA GGCTGGGGGT TGAGAAGGAG TGGTGGCTGG AACCTCGGAT
  GGGAGTCTGA TGACTCCCCG AGTCCAGGGC AAGGCAATAG CCATGATCTC ATGAATGTCT
  CCTTCATGTT GCTCTGACTG AAGTCATGTC ATGGTCAGAG GACAGAGGCC CACTACAGTC
  TCAGAAATGA TCTTGCTTAT                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss135186508	ENSMUSSNP6393622	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs108188618					SNP	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:55131092 () rs orientation: forward

Symbol	Name	Function Class
Rr576916	regulatory region 576916	955 bp distal