rs108186074 SNP Detail

Summary

• ID
  rs108186074
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:50578554 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T CGAGGCCAGC CTGATCTACA GAGTGAGTTC CAGGAGAGTC
  AGGGCTACAC AGAGAAACCC TGTCTCAAAA CAAACAAACA AACAAACAAA CAAACAAACA
  C
  ACACACACAC ACACAAAAAA TAAAGTTGGC TATTATACCA GCACGAGTTC AGAACACCAG
  CAAATCGAGG ACAGGAAGTG GGCCATGGAG CCAGCTGAGA G                    
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss133182418	ENSMUSSNP6177868	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs108186074					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:50578554 () rs orientation: forward

Symbol	Name	Function Class
Gm38807	predicted gene, 38807	within coordinates
Gm44054	predicted gene, 44054	1334 bp downstream
Rr630049	regulatory region 630049	126 bp proximal
Rr630050	regulatory region 630050	221 bp proximal