rs108174216 SNP Detail

Summary

• ID
  rs108174216
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:172531847 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    tctgctgat accctgacaa taaagattgg
  catcagccca aagaactact tctaaacagg tccacatccc ccttgtccta ttaaAGTAGG
  TTTTGAAAAG TCTAAGCCTA CTCCACTCTC TCtgcgtgtg tgtgtgtgtg tgtgtgtgtg
  W
  gagagagagt gtgtgtgtat gcatgtgtga gtgtgcatgt gcatgtgtgt gctcatgtgt
  gtgtgcatgt gtgtgagtgt gtgtgtgctc atgtgtgtgc atgtatgtga gtgtgtgtgt
  atgtgtgtga gtgtatgtac ccacctgtct                                 
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss148320476	ENSMUSSNP1662111	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	T
ss320619739	CHEV_2_172515555	CHEVERUD	SCREENING_POP	f	SNP				A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs108174216					SNP	A	A	T	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:172531847 () rs orientation: forward

Symbol	Name	Function Class
Rr571713	regulatory region 571713	1428 bp distal
Rr571714	regulatory region 571714	1011 bp proximal