rs108166614 SNP Detail

Summary

• ID
  rs108166614
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:141458180 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAACAGCCAA CCAGCTAAAG
  GTATCTCCTC CGATCTTATT TTGGTTTTGG TTTTAAAGGT AGACGTGTGT GTGTGTGTGT
  GTGCGCGTGT GCGTGTGCGT GTGCGTGTGC GTGTGTGTGT GTGTGCTTTG TTATACATCA
  GTGGGTGTGC TCAGTGCAAG CGGTGCATGG GGAGGCAAGA GGGCGACTTG GGGGCTCAGT
  T
  TCGTCTCGCA TCATGTGGGT CCAGGGTTGG CAAGCGGTGT GTGGGGAGGC AAGAGGGCAA
  CTTGGGGGCT CAGTTTCGTC TCCCATCATG TGGGTCCAGG GTTGGCAAAC GCAGGTCCTC
  AGGGTTAGCA GGAAGCTCCT TTACCTGGGC CGTCTCACCA GCCTGTTTCT GTTTTTGCTT
  TGTTTTCTGT TGTTTCTTGT                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss147742749	ENSMUSSNP2258725	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs108166614					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:141458180 () rs orientation: forward

Symbol	Name	Function Class
Gm34863	predicted gene, 34863	within coordinates
Rr603867	regulatory region 603867	1318 bp distal
Rr603868	regulatory region 603868	1052 bp distal
Rr603869	regulatory region 603869	883 bp proximal