rs108166057 SNP Detail

Summary

• ID
  rs108166057
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:149298855 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAAGTACGCG TGGGGGGAGG
  GGCTTACTCT GGCGCTCAGC TTGGCGTCAA ACAACACAAT CCGCTACGCC TGTCTAAACT
  GCTCGTCGCT TCTACCAAGT CAATCCAAGA GTTATTTATG TTACCCACCA GTTTCCCCGA
  TACAGCAATA TCCCCCACTG AAGTGACACT TGAGTGCTGG GGAGGGGGGT AAAGCTAACA
  R
  AAAGGAAGCT AATGGCAGCC TCCCCAAGCT GAACAAGCAT ACCCCCACCT ACATATGCGA
  CTGAAGTGTC ACCTGCATCA AGAAGCTAGC TTGCCTTTTT TCTTTTTCTT TCTTTTGTTT
  TTTTTTTTTT TAAATGTGCA TTGGTGTTTT GCCTGCATAT GTGTCTGTGT GAGGGAGTCA
  GATCTCCTGG AATTGGAGTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss148029584	ENSMUSSNP4324321	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs108166057					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:149298855 () rs orientation: forward

Symbol	Name	Function Class
Kif1b	kinesin family member 1B	Intron
Rr604862	regulatory region 604862	866 bp proximal
Rr604863	regulatory region 604863	1673 bp proximal
Tssr44639	transcription start site region 44639	202 bp upstream