rs108124527 SNP Detail

Summary

• ID
  rs108124527
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:24933700 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGAGGCAGGT GGATTTCTGA GTTTGAGGCC AGCCTGGTCT
  ATAGTGTGAG TTCTAGGACA GCCAGGACTG CACAGAGAGA AACCCTGTCT CGAAAAAAAA
  M
  AAAAAAACAA AAAAAAAAAA AAAGGGTGAT TCTGTGATTA CATATTTACT GGAAGTAATG
  ACTATCATGA GGTACCTGTG CAAATTAAGG CTGACAGTG                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BALB/cJ	BTBR T<+> Itpr3/J	C57BL/6J	C57BL/10J	C57BL/10SnJ	C57L/J	C58/J	CZECHII/EiJ	JF1/MsJ	NON/ShiLtJ	NZW/LacJ	PL/J	PWK/PhJ	QSi3/Ianm	SJL/J	SPRET/EiJ
ss397861506	MGP_WTSI_17_24851671	EVA_MGPV3	EVA_MGPV3	f	SNP	C	A	C	C	C	C	C	A	C	A	C	C	A	C	C	C
SNP Consensus Information
SNP					Consensus Type	BALB/cJ	BTBR T<+> Itpr3/J	C57BL/6J	C57BL/10J	C57BL/10SnJ	C57L/J	C58/J	CZECHII/EiJ	JF1/MsJ	NON/ShiLtJ	NZW/LacJ	PL/J	PWK/PhJ	QSi3/Ianm	SJL/J	SPRET/EiJ
rs108124527					SNP	C	A	C	C	C	C	C	A	C	A	C	C	A	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss397861506	MGP_WTSI_17_24851671	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:24933700 () rs orientation: forward

Symbol	Name	Function Class
Rnf151	ring finger protein 151	1113 bp downstream
Rr523400	regulatory region 523400	1409 bp distal
Rr523401	regulatory region 523401	319 bp proximal