rs108121682 SNP Detail

Summary

• ID
  rs108121682
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:141458146 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACCTCCTCCT CACTTCTTGC
  CTGTTCTCTG CTTGAAACAG CCAACCAGCT AAAGGTATCT CCTCCGATCT TATTTTGGTT
  TTGGTTTTAA AGGTAGACGT GTGTGTGTGT GTGTGTGCGC GTGTGCGTGT GCGTGTGCGT
  GTGCGTGTGT GTGTGTGTGC TTTGTTATAC ATCAGTGGGT GTGCTCAGTG CAAGCGGTGC
  R
  TGGGGAGGCA AGAGGGCGAC TTGGGGGCTC AGTTTCGTCT CGCATCATGT GGGTCCAGGG
  TTGGCAAGCG GTGTGTGGGG AGGCAAGAGG GCAACTTGGG GGCTCAGTTT CGTCTCCCAT
  CATGTGGGTC CAGGGTTGGC AAACGCAGGT CCTCAGGGTT AGCAGGAAGC TCCTTTACCT
  GGGCCGTCTC ACCAGCCTGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss147742732	ENSMUSSNP5157614	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	A
ss321389336	CHEV_4_141286750	CHEVERUD	SCREENING_POP	f	SNP				A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs108121682					SNP	A	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:141458146 () rs orientation: forward

Symbol	Name	Function Class
Gm34863	predicted gene, 34863	within coordinates
Rr603867	regulatory region 603867	1284 bp distal
Rr603868	regulatory region 603868	1018 bp distal
Rr603869	regulatory region 603869	917 bp proximal