rs108101987 SNP Detail

Summary

• ID
  rs108101987
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:149087608 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCTTCTCTT CTGTTGTGCA
  AGAACAAAGT GGGCCCCATG CCAAAAGGGA AGACATGGAA AGGAGAGAGT AATGAACAAA
  AGAACTTGGG GAGGGAGAAG AGAGGAGGGA GGAAATGGAG GCTTTTTAAA AACCAGGTTA
  TACCATCCCA CTGTGTGAAG CGAGAGGGGT GGGTCGACCT GCAGGCATTT GTGGAGCACC
  R
  TGGTGTTTGG GCTGCCCGCA TAAAACCGGC TGGAAGGAGT CCCAGAATAC CAGGATACTA
  AGCAATGTTT CTTTAGTTGG CAGGGCTATG CTGTTCCCTT TTCAATGCCC AAGAAGTCTG
  AAAAGTGAAA GTTGCCCACC CCCGAGGCTG CTGGGAAAGC GGCCTAATGG GTCCCTGGAA
  CAGGTTAGCG AGAGCCAGCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss136070339	ENSMUSSNP4029102	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs108101987					SNP	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:149087608 () rs orientation: forward

Symbol	Name	Function Class
Gm30382	predicted gene, 30382	within coordinates
Gm64772	predicted gene, 64772	within coordinates
Rr587318	regulatory region 587318	1506 bp distal
Rr587319	regulatory region 587319	within coordinates