rs108086026 SNP Detail

Summary

• ID
  rs108086026
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:135002722 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCACATGTA TCTGTGCTGG
  GCCCATGCTG GCTCCCAGCC ACCAGCACAG AGATGGCCCA CACAGGGAAA CAATAGCAAT
  GAAAGGGTCT TTCTGTCTCT TTGCTTAAAT GGGAGGAAGC CTGTGACATT TTCCAAGTCC
  TGAGGTGGTC CAAGTCCTGC CCTTGCTCAT CCGGACACCC TCAGGCACTG GCTCAGACCT
  R
  GAACCTGTGC TCAGGAACCT GGTCACAGTC ATGCCTAGGG GTCTCAGTTT CTACTCTGAT
  GCTCATGAGC ATGGGAGCAC AGACAGATCT GGGAGGAGGA GGAAGAGGAA GACGAAGAGG
  AGAGAAAGTG TTTATTCCGG GAGGTCCTAC AGCACCTTGC TTCCAACTTT GAAAGGCAAG
  ACGTTCCTGC CCTGTGCTCC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss147543406	ENSMUSSNP977248	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs108086026					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:135002722 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15068	CpG island 15068	1788 bp distal
Rr601982	regulatory region 601982	within coordinates
Rr601983	regulatory region 601983	1403 bp proximal