rs108068983 SNP Detail

Summary

• ID
  rs108068983
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:143888561 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGAAGATGCA AGCCCATTTC TGTCTAGTTC ACCGGGAGAT
  TTAATCTCCT TGGAGACAAC TCTGCTCCAC ATGGGGGTCA GGACATAGAT GGGAACAGGA
  K
  CTAGCTCTCT GGTGGCAGTG CAGAGAGATT CTGAATGCCT GTCCGCTGTG CAGGATGACA
  CCCTGGTCCT TAAGGCACTG TCTCTATTCT GGCTTGTGG                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss147779541	ENSMUSSNP2909501	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs108068983					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:143888561 () rs orientation: forward

Symbol	Name	Function Class
Banf2	BANF family member 2	Intron
Gm75473	predicted gene, 75473	226 bp upstream
Rr566364	regulatory region 566364	1588 bp distal
Rr566365	regulatory region 566365	237 bp distal
Rr566366	regulatory region 566366	100 bp distal