rs108055378 SNP Detail

Summary

• ID
  rs108055378
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:119495402 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTTTT TTTGTTGTTT TTTTTTGTTT
  G
  TTTTTTTGTT TTGTTTTGTT TTGTT                                      
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147338600	ENSMUSSNP7011742	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs108055378					SNP	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:119495402 () rs orientation: forward

Symbol	Name	Function Class
Gm75025	predicted gene, 75025	183 bp downstream
Gm75032	predicted gene, 75032	172 bp upstream
H3f3c	H3 histone, family 3C	705 bp downstream
Rr397235	regulatory region 397235	1949 bp downstream
Rr563558	regulatory region 563558	1610 bp distal
Rr563559	regulatory region 563559	1011 bp proximal
Tssr25826	transcription start site region 25826	1229 bp downstream