rs108046532 SNP Detail

Summary

• ID
  rs108046532
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:92260024 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAATGTAGAG GACAGAAATG
  ATGTGATTTC TCAGGCCACC AGTACTTGAG ACTGCCTGCC TTAAAGGTGT TTGCTTGTGT
  AAACAGCATT ACTTGTTTCT TTGGAACAAA ATAATTTCTC TTAAGAAAAG GTCTGAAACA
  CAGTAGCCTT TCCCAAGGCT GTTGCAACAG AGTGCTGACA GGAAAGGGGA AAGCCAACCA
  G
  CTCTAAAATA GGAGTTGGGA AATAATGTTG GTGTTCAGAG AGACAAACCG ATTTGAAGCT
  CCATAGTTCT ATCTATCTTC TCTGAATTGA TCACTACTGA TCATCTCTTT CATATCATCT
  CTTTCAGATC CTGAGAATTC AGCACTATGT CTTACCAACA GCAGCAGTGC AAGCAGCCTT
  GCCAGCCTCC ACCTGTGTGC                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss135481047	ENSMUSSNP6227556	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs108046532					SNP	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:92260024 () rs orientation: forward

Symbol	Name	Function Class
Sprr2e	small proline-rich protein 2E	Intron
Tssr30284	transcription start site region 30284	573 bp downstream