rs108028904 SNP Detail

Summary

• ID
  rs108028904
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:8382637 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAGAG GAGGAGGAGA GGCTCGGAGC
  Y
  GAGTTTGAAT CCCAGATCTG CCCTT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J	MSM/Ms
ss145978391	ENSMUSSNP1556465	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	DBA/2J	MSM/Ms
rs108028904					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:8382637 () rs orientation: forward

Symbol	Name	Function Class
Gm42252	predicted gene, 42252	within coordinates
Rr588523	regulatory region 588523	1416 bp distal
Rr588524	regulatory region 588524	1770 bp distal
Rr588525	regulatory region 588525	215 bp distal
Rr588526	regulatory region 588526	899 bp distal