rs107997335 SNP Detail

Summary

• ID
  rs107997335
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:116946329 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGCTGTAAC TCCAGGATAC
  TCCCAGAAGG CCTTATTCCA GTCTTTTTTC TTGCCCCTTG CACTCACTCC GAATTGGAAC
  AGGATCCTGC TGAACTCCAT CTATTCTGGA CTCTGCTTCC TCTTTTCAGT CTGGTGTGCA
  TCGATGCCTA AGAGGGAGGA AGTGGAGGAC ATGGAACCAC AGCGGACCCC AAAATGGATA
  T
  CATATACTCC ATGCAAGCAA CATCTTTGTT GATTCTGCTT ATTAGTTTCT TCCCAAGAGC
  AAATCTAGTA TCTGACATAC AAGTTGTCTT CGGTAAATAG TCGTCATTCC GTTTGAATGG
  CGTATATCAT AAAATCCTGT ACAGTCTCTG GGTAAAACAC AGATAATCAC CATTACACGG
  GTTTAAAGGC CTAAAACAAA                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ
ss135685009	ENSMUSSNP6104991	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ
rs107997335					SNP	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:116946329 () rs orientation: forward

Symbol	Name	Function Class
Rr583834	regulatory region 583834	334 bp proximal
Rr583835	regulatory region 583835	432 bp proximal