rs107982353 SNP Detail

Summary

• ID
  rs107982353
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:39241529 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGAACCTCA GGCTCCCAGG
  GGTTCTTATA AGCTTTGCTA GCTTACACAG AGGTACTGGC AGCCAAGCTG TGTCTGCTTA
  GAAGAAGGAC CCCAATTCAC ACAGGTTCCG ATATGCCCAG GGGGCCCCTG AGACTTACCC
  CCGACCCCCA CTCTATTTTA TTACCATCTT TTCCGCTTTT CTGCCATTGA CGGTACAGGT
  R
  AGATTCAGGG GACCCAGAAA TACCAGGATT CAACTGTGGC TCTTCCACCC TGTCCTCACG
  TAGAGGGACA AGCAAATGGC TCAAAGCCTA AAGTGACATT TCAGGCTGAA TTCTGCGCTA
  GACAAATAAC TGAGGCTGGG AATTCCAGGA ACCAGAGCCT CACCCCCTCA CACACACACA
  CACACACAGC TGTACAGGAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J	MSM/Ms
ss133127853	ENSMUSSNP2377038	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	DBA/2J	MSM/Ms
rs107982353					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:39241529 () rs orientation: forward

Symbol	Name	Function Class
Gm26008	predicted gene, 26008	1249 bp downstream
Gm53067	predicted gene, 53067	753 bp downstream
Gm66721	predicted gene, 66721	985 bp downstream
Rr628990	regulatory region 628990	501 bp distal
Rr628991	regulatory region 628991	within coordinates