rs107969287 SNP Detail

Summary

• ID
  rs107969287
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:91178897 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTTCCTGGCT AGTGGTAAAG
  CGTGATCCCC AACCTGGAGG GTGGTAGAGA GCAGGCACAT GGACGACCCC GAAAAACCTG
  GAAAGCAGAG GGGAAGGGGA GAGGAAAGAG TCAGAAAGTG TCTTCTACTC GGAATGGAGA
  CACAATTGGA GCCAAACCAC CATAAGGCCT TGCGGGCCAG GCTGCCGGGC GTGGGCTCTG
  Y
  TTCTGGACTC AGGGGAACCA TGGGAGGGCT TCAGGGCAAG GAGCCACATG GCTAGGTTGC
  GCTTAGGAAA GAGCAATCAC AGAAAAGAAA ACAGCGTTTT AAAGCAAAGG ACATGGGCAG
  AAACTTCAAC AGAGAGGAAA AGCAGATGGC TGAGATATGG CTGAGCTCAT CTCAGAGGGT
  CATGTGAATG AAAACCACAC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss133382233	ENSMUSSNP4165716	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs107969287					SNP	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:91178897 () rs orientation: forward

Symbol	Name	Function Class
Rr634420	regulatory region 634420	362 bp distal
Rr634421	regulatory region 634421	183 bp proximal