rs107935359 SNP Detail

Summary

• ID
  rs107935359
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:145409495 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGGAAACTC TCGGGGCTAA
  AAACATTCCA GACATTCCTT AACACTGCCT TCCTCAAAAG GTCGGTTTCT TAGGCTCTTC
  AGAGAGAACG CTGCCCACAC AGTTCACAGG GACCGACGGC CGGCCGCCAC ACAAGCCCTG
  CATTAGCAGA CAGCCAAGGG TGGCCTCCTG TGCCTTGCTC TGAAAGGCTC CCTGTACTCA
  K
  TCCAGAGTCA GAGAGACTCA GTTTTACAGG GGAGCCGAGG ACACTGGGGT CCTCAGTAAA
  GAGGAGCCAT GAGGGAGGTC CGGTTCCCAG CAATACAGTG AAGCTACACA CAGGGTGTGT
  GTCTTGGTAC GGTGTGTGTT TTCTTTGGAA ACAGGCACTT AAATGAAGTT TCCTTTAGCA
  AAATCTTGCC CCCAACAAGA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss136039640	ENSMUSSNP7003937	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs107935359					SNP	G	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:145409495 () rs orientation: forward

Symbol	Name	Function Class
Rr586822	regulatory region 586822	1441 bp distal
Rr586823	regulatory region 586823	within coordinates
Rr586824	regulatory region 586824	1562 bp proximal