rs107930817 SNP Detail

Summary

• ID
  rs107930817
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:30241315 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTTTACTAT GATGTTTAGA
  CCAGAATGAT CTTCAACACT ACCAAAATGT CACAAATTTG ATAGTGAGTA CACCTCTTTC
  AGAAGGGTGC TGCTTCCACA CTAAGGCTTA CTCATCCCCA AGACAGATCT AGGGGCATGT
  CATGTACATT GCTAGATTAG CCACATCCAT GGAAACCCCT CTCAAGCTCT AGTGTGAAAC
  K
  CCATCATTAA AAACCACTTC AAGCTCTTTC TCCAATGGAC CACAAATGAC CTAATAATGT
  CCCCTCTGTG GAAACTAAGA GATCATATGA TGAATTCTTT TTAGAGAAGT GTTTCATTCA
  TTATTCTTAA AAAGAAAAAA AAAAAGTCTT AAAAGTAGAA AATGCTGATG AATGGCTACT
  ACAAGTAAAT AATTCCAATT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss134729715	ENSMUSSNP7066464	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs107930817					SNP	T	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:30241315 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Mecom	MDS1 and EVI1 complex locus			Intron
				Noncoding-Transcript-Variant
Rr574734	regulatory region 574734			857 bp proximal