rs107907798 SNP Detail

Summary

• ID
  rs107907798
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:20562643 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AACAGCAGCA GAATGCCAAA
  AGGCTTCAGA GAGAGGCATA GAGCCCTGCT TAGCAGAAGG GAAGAAGTGT TATTTGGCCT
  CCCAAGACCA TTTCGAGTCT GTTTTTCTGT TTCACATCCT CTTACATTAG GTCATCCTGC
  CTCCATTTCC AGCCTGGGTT GTCTGCCTAT CTCTTATTCC CCATCCCTAC CCCGTACATC
  C
  CTTTCCTCTG TCCCATTTGA CAGTCACCTT CTGGGGGACA GTAAGAGGGA GGGGGATAGA
  GATTATACCT GACTCTGCCT AGCACACAGT GTGCTCTCAT GCAGGGAGGC TGACCCACAG
  AGAAGGTGCA CGGTCCTCTG CTAAGACCCA CCAGTGGGCA GGAAGGCCAC ATCCAGGTCT
  GAGCTGTGTT TCCAGCTTTC                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	MSM/Ms
ss134672228	ENSMUSSNP7247979	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
SNP Consensus Information
SNP					Consensus Type	MSM/Ms
rs107907798					SNP	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:20562643 () rs orientation: forward

Symbol	Name	Function Class
Rr574081	regulatory region 574081	780 bp proximal
Rr574082	regulatory region 574082	909 bp proximal