rs107904286 SNP Detail

Summary

• ID
  rs107904286
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:138784399 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAAGGCCAAT AGGAAAGGGT
  AGAATAGAAG GTGGAACATC TGGGAGGAAG AAAGAATTCT GGGATAGAGC CAAGCATGGG
  AGATTCACCC AGGAAGATGG GACAAGATGG ACACATGGTA CCTGAGCCCA GTCCCCTGGC
  AGAATGTAGA ATAAAATAAA TGGGATAATT TAAGTTATGA TCTAGCTATA TGGCCAATGC
  R
  TTTGTAAATA TATTTTGAGT CTGAGTTTTA TCTCTGGGAG CATGGGACTG AGAGGAAATA
  CCAGGCCTAA ACTTCTCCAG TTATTCAATA ACTAAATAGA ACAACCAGTC TATATTATTT
  TATTTTAAGA AAAAGTTTCT CTACTGGCTT GAGTGTCGGA CTGTGTTCGC TCTTTGTGTT
  CCTAGATGTC CCTGCTTTCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss135960464	ENSMUSSNP2489734	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs107904286					SNP	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:138784399 () rs orientation: forward

Symbol	Name	Function Class
Rr586245	regulatory region 586245	417 bp distal
Rr586246	regulatory region 586246	1285 bp proximal