rs107895878 SNP Detail

Summary

• ID
  rs107895878
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:92259562 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTTTGGGAC CTGCCCACTA
  TCAGTCAGTG TTGCTCCCAC TCGACTGGCC AGATAGTCCT ATAAATTGGT CCTTGACTGT
  GAGACTGCAG ACTCCTGGTA CTCAGGTCCT AGGCTACTTT GGAGAACCTG GCAAGTGTCT
  TTTCTTGAGT TGCTCTGTCA TGTTGTTCTT CCTATGTGCT GTAGTCAATT TTGAGGTAGT
  G
  TGTGTCTTGA GTTCAGTTTT GATCAAGGGA TGAATGGTAG CTAGCTAGCA GTCAGAAAAT
  TAGCAGTGGA TACAATAGCC AATTGTGATA AGTGGCTTTT TGTTACATTT GGTAAGTTGT
  AGAACAGAGG ATATTTCTCT TTCATGTGTA TCTTTTGGTG TTCTGTGAAA GGCTATGTAC
  CTAAGTAGGT ATGAGAACCT                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss135481023	ENSMUSSNP6003931	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs107895878					SNP	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:92259562 () rs orientation: forward

Symbol	Name	Function Class
Sprr2e	small proline-rich protein 2E	Intron
Tssr30284	transcription start site region 30284	111 bp downstream