rs107836793 SNP Detail

Summary

• ID
  rs107836793
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:119469582 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGTGCTGGA GGCGGAGGTC
  TGGGGCTGCA ATTATTTTTT AAGGGATTAC TAGAGAAGAA TAGAAGCAGC CAGGACCGCC
  CCCACCTGCT CTCCCCTTGG CCCTGCTTCA GACATATACT GAGTCTCTCA GAGACCAGAG
  CCACACTCTT CCTTTTCCCT GTGGAGGGGC AGCCACCTCG GAACACCACT GTTGCAGAAA
  K
  AAAGAGTTTG GGGAAAACTT GCAATTCCCG TTTTGACCCC ATTTAAGATC TCATGTATAT
  AACCACTGTC AAACAGGATA CTGAGTGTGG GGCGTGAACT CATTCATTAA CCTCTAACCC
  CTGCCCTGTA TGCCTAGGGG AGATTTGCCC AGTGCCCAGG CACTGCCAGA GTCTGGAGCA
  CTCACTGGGG CTTTGGAGGG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss133589850	ENSMUSSNP6798305	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs107836793					SNP	T	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:119469582 () rs orientation: forward

Symbol	Name	Function Class
Rr637700	regulatory region 637700	933 bp distal
Rr637701	regulatory region 637701	1658 bp distal
Rr637702	regulatory region 637702	within coordinates
Wnt5b	wingless-type MMTV integration site family, member 5B	Intron